
{"id":108,"date":"2015-06-10T19:23:05","date_gmt":"2015-06-10T19:23:05","guid":{"rendered":"https:\/\/bioinformatics.rockefeller.edu\/?page_id=108"},"modified":"2024-08-15T22:11:18","modified_gmt":"2024-08-15T22:11:18","slug":"links-for-bioinformatics","status":"publish","type":"page","link":"https:\/\/bioinformatics.rockefeller.edu\/?page_id=108","title":{"rendered":"Education Resources"},"content":{"rendered":"\n<h2 class=\"wp-block-heading\">R<sup>3 <\/sup>Workshops<\/h2>\n\n\n\n<hr class=\"wp-block-separator has-css-opacity\"\/>\n\n\n\n<p><a href=\"https:\/\/rocku.zoom.us\/rec\/share\/0R-_IdCg6uTgRdu5hWHkOq76SaQRzX3JYh6S49QhIyObYsDrGYF_GNdB_uyCk8nK.g_7iPm-Ko8ve3-ly\">RNA-seq Analysis<\/a><\/p>\n\n\n\n<p><a href=\"https:\/\/rocku.zoom.us\/rec\/share\/oAeZ3no0zytTWjaerxamEYFtQBGX2YhcIQBQK56tjNbrDPQBc8gFxA2mcH3FnDyN.I5sdjfp-zC5M9u5C\">Introduction to GIT<\/a> (Passcode: y5F1j8Z@)<\/p>\n\n\n\n<h2 class=\"wp-block-heading\">Useful Links<\/h2>\n\n\n\n<hr class=\"wp-block-separator has-css-opacity\"\/>\n\n\n<div><strong>Unix tutorials\u00a0<\/strong><\/div>\n<p><a href=\"http:\/\/www.ee.surrey.ac.uk\/Teaching\/Unix\/\">http:\/\/www.ee.surrey.ac.uk\/Teaching\/Unix\/<\/a><\/p>\n<div><strong>R &amp; Bioconductor<\/strong><\/div>\n<div><a href=\"http:\/\/www.johndcook.com\/blog\/r_language_for_programmers\/\">http:\/\/www.johndcook.com\/blog\/r_language_for_programmers\/<\/a><\/div>\n<div><a href=\"http:\/\/manuals.bioinformatics.ucr.edu\/home\/R_BioCondManual\">http:\/\/manuals.bioinformatics.ucr.edu\/home\/R_BioCondManual<\/a><\/div>\n<div><a href=\"http:\/\/www.bioconductor.org\/help\/course-materials\/\">http:\/\/www.bioconductor.org\/help\/course-materials\/<\/a><\/div>\n<div>\u00a0<\/div>\n<div><strong>Amazon cloud for Galaxy and command line<\/strong><\/div>\n<div><a href=\"http:\/\/training.bioinformatics.ucdavis.edu\/docs\/2013\/12\/AWS\/\">http:\/\/training.bioinformatics.ucdavis.edu\/docs\/2013\/12\/AWS\/<\/a><\/div>\n<div>\u00a0<\/div>\n<div><strong>Python:<\/strong><\/div>\n<div><a href=\"http:\/\/www.diveintopython3.net\">http:\/\/www.diveintopython3.net<\/a><\/div>\n<div>\u00a0<\/div>\n<div><strong>Galaxy:<\/strong><\/div>\n<div><a href=\"https:\/\/usegalaxy.org\/u\/aun1\/p\/galaxy101\">https:\/\/usegalaxy.org\/u\/aun1\/p\/galaxy101<\/a><\/div>\n<div><a href=\"https:\/\/wiki.galaxyproject.org\/use\">https:\/\/wiki.galaxyproject.org\/use<\/a><\/div>\n<div>\u00a0<\/div>\n<div><strong>Online courses:<\/strong><\/div>\n<div>Bioinformaitcs Methods I &amp; II from University of Toronto: This is a well rounded course that covers many sub field in bioinformatics<\/div>\n<div><a href=\"https:\/\/www.coursera.org\/learn\/bioinformatics-methods-1\">https:\/\/www.coursera.org\/learn\/bioinformatics-methods-1<\/a><\/div>\n<div><a href=\"https:\/\/www.coursera.org\/learn\/bioinformatics-methods-2\">https:\/\/www.coursera.org\/learn\/bioinformatics-methods-2<\/a><\/div>\n<div>\u00a0<\/div>\n<div>\n<div>A set of 7 course from HarvardX on R, Bioconductor, statistical analysis, RNAseq, DNAseq, CHIPseq.<\/div>\n<div><a href=\"https:\/\/www.class-central.com\/mooc\/2960\/edx-ph525-1x-statistics-and-r-for-the-life-sciences\">https:\/\/www.class-central.com\/mooc\/2960\/edx-ph525-1x-statistics-and-r-for-the-life-sciences<\/a><\/div>\n<\/div>\n<div>\u00a0<\/div>\n<div><strong>QIAGEN:<\/strong><\/div>\n<ul>\n<li><a href=\"https:\/\/bioinformatics.rockefeller.edu\/?page_id=362\">Getting Stared with IPA<\/a><\/li>\n<\/ul>\n<div>\u00a0<\/div>\n<div>\u00a0<\/div>\n<div><strong>REDCap<\/strong><\/div>\n<div><a href=\"https:\/\/bioinformatics.rockefeller.edu\/wp-content\/uploads\/REDCap_guide.pdf\">REDCap_guide<\/a><\/div>\n<div>\u00a0<\/div>\n\n\n<p><\/p>\n","protected":false},"excerpt":{"rendered":"<p>R3 Workshops RNA-seq Analysis Introduction to GIT (Passcode: y5F1j8Z@) Useful Links Unix tutorials\u00a0 http:\/\/www.ee.surrey.ac.uk\/Teaching\/Unix\/ R &amp; Bioconductor http:\/\/www.johndcook.com\/blog\/r_language_for_programmers\/ http:\/\/manuals.bioinformatics.ucr.edu\/home\/R_BioCondManual http:\/\/www.bioconductor.org\/help\/course-materials\/ \u00a0 Amazon cloud for Galaxy and command line http:\/\/training.bioinformatics.ucdavis.edu\/docs\/2013\/12\/AWS\/ \u00a0 Python: http:\/\/www.diveintopython3.net \u00a0 Galaxy: https:\/\/usegalaxy.org\/u\/aun1\/p\/galaxy101 https:\/\/wiki.galaxyproject.org\/use \u00a0 Online courses: Bioinformaitcs Methods I &amp; II from University of Toronto: This is a well rounded course that &hellip; <a href=\"https:\/\/bioinformatics.rockefeller.edu\/?page_id=108\">Continue reading <span class=\"meta-nav\">&rarr;<\/span><\/a><\/p>\n","protected":false},"author":6,"featured_media":0,"parent":126,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"template-sidebar-left.php","meta":{"_bbp_topic_count":0,"_bbp_reply_count":0,"_bbp_total_topic_count":0,"_bbp_total_reply_count":0,"_bbp_voice_count":0,"_bbp_anonymous_reply_count":0,"_bbp_topic_count_hidden":0,"_bbp_reply_count_hidden":0,"_bbp_forum_subforum_count":0,"footnotes":""},"class_list":["post-108","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/bioinformatics.rockefeller.edu\/index.php?rest_route=\/wp\/v2\/pages\/108","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/bioinformatics.rockefeller.edu\/index.php?rest_route=\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/bioinformatics.rockefeller.edu\/index.php?rest_route=\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/bioinformatics.rockefeller.edu\/index.php?rest_route=\/wp\/v2\/users\/6"}],"replies":[{"embeddable":true,"href":"https:\/\/bioinformatics.rockefeller.edu\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=108"}],"version-history":[{"count":21,"href":"https:\/\/bioinformatics.rockefeller.edu\/index.php?rest_route=\/wp\/v2\/pages\/108\/revisions"}],"predecessor-version":[{"id":565,"href":"https:\/\/bioinformatics.rockefeller.edu\/index.php?rest_route=\/wp\/v2\/pages\/108\/revisions\/565"}],"up":[{"embeddable":true,"href":"https:\/\/bioinformatics.rockefeller.edu\/index.php?rest_route=\/wp\/v2\/pages\/126"}],"wp:attachment":[{"href":"https:\/\/bioinformatics.rockefeller.edu\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=108"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}